We provide a number of different LinkSets useful for different types of network extension.
Note: Originally, we focused on regulatory interactions but people have been using CyTargetLinker in a lot of different ways, so we decided to rename our RegINs to LinkSets.
If you are looking for a specific version of a LinkSet, please check our archive.
If you are missing a LinkSet for a specific database, species or use case, please contact us and we will try to create the network files.
Do you want to create your own LinkSet? Find our more. If you have any questions, please contact us.
Databases
| Database | Interaction Types | LinkSets |
| miRTarBase | microRNA-target gene | miRTarBase link sets |
| TargetScan | microRNA-target gene | TargetScan link sets |
| TransmiR | transcription factor – microRNA interactions | TransmiR link sets |
| miRBase | primary transcript – miRNA | miRBase transcripts |
| ChEMBL | compound – protein target | ChEMBL link sets |
| DrugBank | drug-target interactions | DrugBank link sets |
| WikiPathways | gene – pathway associations | WikiPathways link sets |