We provide a number of different LinkSets useful for different types of network extension.
Note: Originally, we focused on regulatory interactions but people have been using CyTargetLinker in a lot of different ways, so we decided to rename our RegINs to LinkSets.
If you are looking for a specific version of a LinkSet, please check our archive.
If you are missing a LinkSet for a specific database, species or use case, please contact us and we will try to create the network files.
|miRTarBase||microRNA-target gene||miRTarBase link sets|
|TargetScan||microRNA-target gene||TargetScan link sets|
|TransmiR||transcription factor – microRNA interactions||TransmiR link sets|
|miRBase||primary transcript – miRNA||miRBase transcripts|
|ChEMBL||compound – protein target||ChEMBL link sets|
|DrugBank||drug-target interactions||DrugBank link sets|
|WikiPathways||gene – pathway associations||WikiPathways link sets|